All GRE Subject Test: Biochemistry, Cell, and Molecular Biology Resources
Example Questions
Example Question #1 : Genomics
If the recombination frequency between two genes is __________ then the genes are most likely __________.
zero . . . far apart
low . . . far apart
high . . . far apart
high . . . linked
high . . . far apart
Recombination frequencies are used to map genes on chromosomes by determining their relative distances from other genes. If a distance is large, there is a higher chance that a recombination event can occur between these two genes. Linkage occurs when genes are so close to one another that the genes always segregate together (recombination never occurs between them). The only answer that makes sense is that high recombination frequencies lead to the conclusion that two genes are far apart.
A low recombination frequency would indicate that the gene loci are close together, and a recombination frequency of zero would indicate linked genes.
Example Question #22 : Gene Regulation And Genomics
A scientist performs a series of experiments to determine the recombination frequencies between the following genes. He acquires the following data:
W-X: 3%
X-Y: 2%
Y-Z: 13%
Z-W: 8%
Which of the following choices places the genes in the correct order relative to one another?
W, X, Y, Z
X, W, Z, Y
Z, W, X, Y
W, Y, Z, X
Z, W, X, Y
The larger the recombination frequency, the larger the distance between two genes. By looking at the data, we know that genes W and X are close to one another. Also, genes X and Y are close to one another. Gene Z, however, seems to be far away from both W and Y (but closer to W). We can represent these distances relatively in a picture:
W - - - X (3)
X - - Y (2)
Y - - - - - - - - - - - - - Z (13)
Z - - - - - - - - W (8)
The most likely explanation is that W, X, and Y are close to one another and Z is located slightly farther away on whichever side W is closest. A spatial map would look something like this:
Z - - - - - - - - - - W - - - X - - Y
Example Question #2 : Genomics
If two genes are found to have a recombination frequency of 25%, what does this mean about the location of the two genes?
The genes are linked
The genes are located on the same chromosome and are on opposite ends of the chromosome
The genes are on different chromosomes
The genes are located on the same chromosome and neither extremely close, nor extremely far apart
The genes are located on the same chromosome and neither extremely close, nor extremely far apart
If the genes were linked, there would be an incredibly small recombination frequency. If the genes were on opposite ends of the chromosome or on separate chromosomes, the recombination frequency would approach the maximum of 50%.
Because the recombination frequency is relatively intermediate, we can conclude that the distance between the genes does not fall at either extreme. The genes are neither very close, nor very far apart.
Example Question #1 : Help With Linkage
What does it mean to say that two genes are linked?
The genes overlap one another
The genes almost always segregate together during meiosis
The genes share a promoter
The genes code for the same mRNA
The genes almost always segregate together during meiosis
Genetic linkages are determined by frequencies of recombination. These are measures of how often chromosomal crossovers will take place between two genes. The closer the loci of the two genes are on a chromosome, the less likely a crossover event will separate the two genes. If the recombination frequencies are sufficiently low, the genes are considered to be linked.
Genetic linkage has nothing to do with genes coding for the same mRNA, sharing a promoter, or overlapping one another. Linked genes still code for distinctly separate traits/proteins and have different loci (don't overlap).
Example Question #3 : Genomics
Which of the following is true of gene families?
I. They likely arose from gene duplications
II. They are only seen in eukaryotic genomes
III. Members of the same family have identical DNA and amino acid sequences
II and III
I only
I, II, and III
I and II
I only
Gene families consist of several copies of genes that encode very similar proteins. These likely arose due to gene duplications, and were altered by mutation over time to generate separate similar proteins. It is not a requirement that members of gene families have identical DNA or amino acid sequences. Both prokaryotes and eukaryotes have gene families.
A common example is the homeobox, or Hox, gene family, which codes for several proteins that are essential for developmental timing and orientation.
Example Question #6 : Genomics
Which of the following is not true about transposable elements?
Transposable elements are only found in eukaryotes
Transposable elements are primarily considered non-coding DNA
Transposable elements often move around the genome
Transposable elements can cause disease
Transposable elements are only found in eukaryotes
Transposable elements are portions of the DNA that are free to move around the genome and are generally considered non-coding DNA. This can be potentially dangerous, however. Transposable elements can insert themselves in the coding regions of genes, thus making them non-functional. This can lead to disease. Both eukaryotic and prokaryotic genomes contain transposable elements.
Example Question #4 : Genomics
Transposable elements, or transposons, are separated into two classes. Which of these categories of life have class I transposons in their genomes?
I. Bacteria
II. Yeast
III. Eukaryotes
None of these
II and III
I and II
I, II, and III
III only
II and III
Class I transposable elements are RNA-mediated elements of a single evolutionary origin, and are found in yeast, which only have class I elements, and in eukaryotes, which have both class I and class II elements. Bacteria only have class II elements, and hence are not included in the correct answer to this question.
Example Question #5 : Genomics
What differentiates a LTR retrotransposon and a retrovirus?
Retroviruses do not insert DNA into their host
LTR retrotransposons cannot move between organisms
None of these are correct
Retroviruses encode an envelope protein
Retroviruses are the only ones present in eukaryotes
Retroviruses encode an envelope protein
The only difference between most LTR retrotransposons and retroviruses are that retroviruses can encode an envelope protein. Phylogenetic analyses have shown that retrotransposons and retroviruses are extremely closely related, and may be direct ancestors of one another.
Example Question #8 : Genomics
The hybrid dysgenesis phenomenon was observed in Drosophila flies. It was determined that this was caused by a transposon no longer under control in wild type - lab strain crosses. What are transposons commonly controlled by in their hosts?
The immune system
Other types of transposons
RNAi and piRNAs
A transposase inhibitor
None of these
RNAi and piRNAs
Movement of transposons is very commonly controlled by RNA interference. The RNAi system cuts up problematic RNAs, and uses these small pieces to target transposons for destruction.
Example Question #7 : Genomics
How do transposons rapidly propogate through and between species?
Horizontal transfer
Vertical transfer
Bacterial infections
Transposons cannot move between species
None of these are correct
Horizontal transfer
It is hypothesized that transposons can rapidly move through populations and species by horizontal transfer, most likely through viruses.
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